BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003B09SP1|AL425076
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1512 1880 0.0
>3x_Contig1512
Length = 8803
Score = 1880 bits (944), Expect = 0.0
Identities = 971/982 (98%), Gaps = 2/982 (0%)
Strand = Plus / Minus
Query: 1 atgcttccagtaaggagccatctcccaaagtcgatatccaatggccgagacaatcgtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6982 atgcttccagtaaggagccatctcccaaagtcgatatccaatggccgagacaatcgtctc 6923
Query: 61 ccgaagtcaatgatgataagatcaagaaaaataccactgcgaaggagagagctaagaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6922 ccgaagtcaatgatgataagatcaagaaaaataccactgcgaaggagagagctaagaaaa 6863
Query: 121 ggaaacagtcaacgttatccaacttattggcaagtaagaaggagaaagaggaatcaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6862 ggaaacagtcaacgttatccaacttattggcaagtaagaaggagaaagaggaatcaaaga 6803
Query: 181 agaaaaatgtatcattaagtcttatgraattcatraaataactataaacagaaaagagag 240
|||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||
Sbjct: 6802 agaaaaatgtatcattaagtcttatggatttcatgaaataactataaacagaaaagagag 6743
Query: 241 tctacacttaaaatgttagttgtaaaaattagagctaggaagacrgwawwtctgtcgata 300
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 6742 tctacacttaaaatgttagttgtaaaaattagagctaggaagacggtttttctgtcgata 6683
Query: 301 tacaacgatcaaagaaaaataatctcataagagagttcgtaattgttatcagcctgtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6682 tacaacgatcaaagaaaaataatctcataagagagttcgtaattgttatcagcctgtcaa 6623
Query: 361 actaaggagatcagttaagctcctcacagctttcgatttttcagcagaatttgtttgttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6622 actaaggagatcagttaagctcctcacagctttcgatttttcagcagaatttgtttgttg 6563
Query: 421 agctacggagtttgtgcttccctgactgataaagctggatatggatgcagtcgaagggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6562 agctacggagtttgtgcttccctgactgataaagctggatatggatgcagtcgaagggga 6503
Query: 481 cttaactatgccgttatcattatttgcatcattagtctttgtagcgtttttatcggcacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6502 cttaactatgccgttatcattatttgcatcattagtctttgtagcgtttttatcggcacc 6443
Query: 541 agagaatgatgtttgtgtaatcgaagcatagccattgtataaatttcgatctactgattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6442 agagaatgatgtttgtgtaatcgaagcatagccattgtataaatttcgatctactgattc 6383
Query: 601 catttcatcatcggtttcgttaacttcattactttttgtggtgctgtttccaccattctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6382 catttcatcatcggtttcgttaacttcattactttttgtggtgctgtttccaccattctt 6323
Query: 661 cactgcagctgtaaaatgtttctgtctgatgcaagctttcacccatcttcgtctcctgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6322 cactgcagctgtaaaatgtttctgtctgatgcaagctttcacccatcttcgtctcctgta 6263
Query: 721 ttggcccctttcaccattcagctccacatcatatacccattttgtttcattgtcaacatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6262 ttggcccctttcaccattcagctccacatcatatacccattttgtttcattgtcaacatc 6203
Query: 781 aacgtactgtatgaaacctgcagatacccattccgta-gatgaaggtctaaagtccaatc 839
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 6202 aacgtactgtatgaaacctgcagatacccattccgtaggatgaaggtctaaagtccaatc 6143
Query: 840 tacattaagtagccaatcccattctgcaggaggctttacttctgccaatgtctgaacgtt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6142 tacattaagtagccaatcccattctgcaggaggctttacttctgccaatgtctgaacgtt 6083
Query: 900 aggtatttgactggtcgatagctctttcatcctactctcagaaaacaatgcgtattcatc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6082 aggtatttgactggtcgatagctctttcatcctactctcagaaaacaatgcgtattcatc 6023
Query: 960 tgtagaataa-cmaccaattcc 980
|||||||||| | |||||||||
Sbjct: 6022 tgtagaataaccaaccaattcc 6001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7491
Number of Sequences: 1807
Number of extensions: 7491
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)